STRINGSTRING
gll1420 protein (Gloeobacter violaceus) - STRING interaction network
"gll1420" - Transcriptional regulator in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1420Transcriptional regulator (202 aa)    
Predicted Functional Partners:
glr1421
Short-chain dehydrogenase (259 aa)
 
     
  0.848
gll0188
TetR family transcriptional regulatory protein (192 aa)
   
          0.671
glr1423
Oxidoreductase (321 aa)
 
     
  0.615
gll0876
AcrB/AcrD/AcrF family multidrug efflux protein (1076 aa)
 
   
  0.550
glr1422
Hypothetical protein (292 aa)
              0.533
glr4028
RND efflux transporter (1041 aa)
   
   
  0.472
glr3988
RND multidrug efflux transporter (1050 aa)
   
   
  0.472
glr1746
AcrB/AcrD/AcrF family protein (850 aa)
   
   
  0.472
glr0806
AcrB/AcrD/AcrF family protein (1022 aa)
   
   
  0.472
glr0264
AcrB/AcrD/AcrF family protein (1028 aa)
   
   
  0.472
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (8%) [HD]