STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1504Aldehyde dehydrogenase; ORF_ID:gll1504; Belongs to the aldehyde dehydrogenase family. (512 aa)    
Predicted Functional Partners:
gll0159
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.937
glr4425
Glutathione dependent formaldehyde dehydrogenase; ORF_ID:glr4425; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
 0.929
glr1000
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.927
gll2836
Alcohol dehydrogenase; ORF_ID:gll2836.
 
 
 0.910
gll4111
Alcohol dehydrogenase; ORF_ID:gll4111.
 
 
 0.910
gsr3993
Acylphosphatase; ORF_ID:gsr3993; probable acylphosphatase.
    
 0.909
gll0958
ORF_ID:gll0958; probable urea amidolyase.
  
  
 0.874
glr0003
ORF_ID:glr0003; probable channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.779
glr1148
Probable endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
      
 0.758
glr0961
ORF_ID:glr0961; probable urea amidolyase.
     
 0.749
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus PCC 7421, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421
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