STRINGSTRING
gll1793 protein (Gloeobacter violaceus) - STRING interaction network
"gll1793" - Polysaccharide transporter in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1793Polysaccharide transporter (499 aa)    
Predicted Functional Partners:
gll1796
Hypothetical protein (676 aa)
 
   
  0.944
gll1792
Glycosyltransferase (219 aa)
   
   
  0.922
glr0454
Hypothetical protein (676 aa)
 
 
  0.921
gll1794
Glycosyltransferase (359 aa)
 
   
  0.914
glr4310
Hypothetical protein (758 aa)
 
 
  0.877
glr3785
Hypothetical protein (770 aa)
 
 
  0.855
gll1797
Polysaccharide export outer membrane protein (323 aa)
 
 
 
  0.844
gll3716
Hypothetical protein (683 aa)
 
   
  0.825
glr3855
Hypothetical protein (496 aa)
   
          0.777
gll1798
UDP-glucose dehydrogenase (458 aa)
     
 
  0.747
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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