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gll1826 protein (Gloeobacter violaceus) - STRING interaction network
"gll1826" - AraC family transcriptional regulator in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1826AraC family transcriptional regulator (336 aa)    
Predicted Functional Partners:
glr1828
Hypothetical protein (227 aa)
              0.615
glr1827
Hypothetical protein (643 aa)
              0.615
gll1979
ThiJ family protein (282 aa)
 
       
0.567
gll0294
ThiJ family protein (220 aa)
 
       
0.552
gll0908
ThiJ/PfpI family protein (202 aa)
 
       
0.545
gsl1825
Hypothetical protein (91 aa)
 
          0.520
lysS
lysyl-tRNA synthetase (497 aa)
       
      0.497
gll3808
AraC family transcriptional regulator (293 aa)
   
          0.487
gsl1824
Hypothetical protein (91 aa)
              0.452
glr4332
Hypothetical protein (265 aa)
 
            0.427
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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