STRINGSTRING
gll1940 protein (Gloeobacter violaceus) - STRING interaction network
"gll1940" - Fatty acid desaturase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1940Fatty acid desaturase (330 aa)    
Predicted Functional Partners:
gll1939
Cyclopropane-fatty-acyl-phospholipid synthase (669 aa)
 
        0.931
gll1941
Polyketide synthase (963 aa)
   
   
  0.901
gll1942
Cytochrome P-450 like protein (423 aa)
   
 
  0.875
gll1936
Cyclopropane-fatty-acyl-phospholipid synthase (296 aa)
 
        0.819
gsl1945
Hypothetical protein (95 aa)
 
   
  0.818
gll1944
Polyketide synthase (619 aa)
   
   
  0.782
gll1938
Fatty acid desaturase (319 aa)
 
       
0.751
gsl1937
Hypothetical protein (94 aa)
 
   
  0.746
gsl1943
Hypothetical protein (91 aa)
              0.692
gll1935
Cytochrome P450 like protein (408 aa)
   
 
  0.658
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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