STRINGSTRING
gll1944 protein (Gloeobacter violaceus) - STRING interaction network
"gll1944" - Polyketide synthase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1944Polyketide synthase (619 aa)    
Predicted Functional Partners:
gll1948
acyl-CoA synthetase (596 aa)
     
  0.986
gll1951
Phosphopantetheinyltransferase family protein (255 aa)
 
 
  0.986
gll1953
acyl-CoA synthetase (584 aa)
     
  0.973
glr2851
Hypothetical protein (268 aa)
 
 
  0.961
gll1934
Thioesterase (262 aa)
   
  0.954
gsl1945
Hypothetical protein (95 aa)
     
  0.951
glr2850
Thioesterase (257 aa)
   
  0.927
gsl1943
Hypothetical protein (91 aa)
 
          0.907
gll1958
Hypothetical protein (816 aa)
          0.876
gll2145
Malonyl CoA-ACP transacylase (295 aa)
     
  0.871
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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