STRINGSTRING
gll1946 protein (Gloeobacter violaceus) - STRING interaction network
"gll1946" - Fatty acid desaturase in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1946Fatty acid desaturase (317 aa)    
Predicted Functional Partners:
gll1947
Fatty acid desaturase (332 aa)
 
       
0.866
gsl1945
Hypothetical protein (95 aa)
 
   
  0.854
gll1944
Polyketide synthase (619 aa)
   
   
  0.817
gll1939
Cyclopropane-fatty-acyl-phospholipid synthase (669 aa)
 
        0.815
gll1948
acyl-CoA synthetase (596 aa)
   
        0.795
gll1951
Phosphopantetheinyltransferase family protein (255 aa)
   
        0.785
gll1950
Long-chain fatty-acid-CoA ligase (532 aa)
   
        0.784
gll1952
Hypothetical protein (492 aa)
              0.783
gll1949
Oxidoreductase (336 aa)
              0.783
gll1936
Cyclopropane-fatty-acyl-phospholipid synthase (296 aa)
 
        0.753
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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