STRINGSTRING
gll1954 protein (Gloeobacter violaceus) - STRING interaction network
"gll1954" - Polyketide synthase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1954Polyketide synthase (2049 aa)    
Predicted Functional Partners:
gll1951
Phosphopantetheinyltransferase family protein (255 aa)
 
 
  0.992
gll1953
acyl-CoA synthetase (584 aa)
 
  0.985
glr2851
Hypothetical protein (268 aa)
 
 
  0.981
gll1948
acyl-CoA synthetase (596 aa)
 
  0.980
gll1941
Polyketide synthase (963 aa)
 
   
0.978
gll1955
Polyketide synthase (103 aa)
 
     
  0.956
gll1950
Long-chain fatty-acid-CoA ligase (532 aa)
 
 
  0.931
gll1957
Glycolipid synthase (1427 aa)
 
   
0.905
gll1956
Hypothetical protein (547 aa)
 
   
  0.868
gll1959
Glycolipid synthase (1296 aa)
 
   
0.864
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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