STRINGSTRING
gll1978 protein (Gloeobacter violaceus) - STRING interaction network
"gll1978" - Ferrichrome-iron receptor in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll1978Ferrichrome-iron receptor (719 aa)    
Predicted Functional Partners:
gll1979
ThiJ family protein (282 aa)
   
        0.777
gll0343
Ferrichrome-iron receptor (792 aa)
   
   
  0.753
gll0312
Hypothetical protein (370 aa)
 
        0.738
gll0302
Ferric aerobactin receptor (797 aa)
   
   
  0.736
gll0896
Hypothetical protein (764 aa)
 
   
  0.726
glr2404
Hypothetical protein (256 aa)
   
 
  0.723
glr1389
Hypothetical protein (232 aa)
   
 
  0.723
gll3972
Hypothetical protein (368 aa)
 
        0.723
glr1815
Hypothetical protein (261 aa)
   
 
  0.723
gll0362
Hypothetical protein (358 aa)
 
        0.710
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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