STRINGSTRING
gll2002 protein (Gloeobacter violaceus) - STRING interaction network
"gll2002" - Hydrolase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2002Hydrolase (260 aa)    
Predicted Functional Partners:
gll2004
Oxidoreductase (535 aa)
 
 
      0.900
gll2003
Hypothetical protein (445 aa)
   
        0.859
glr3546
Hydrolase (284 aa)
   
          0.758
gll2335
Hypothetical protein (288 aa)
   
          0.737
gll3677
Hypothetical protein (349 aa)
   
          0.726
gll1217
Hypothetical protein (297 aa)
   
          0.718
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl- [acyl-carrier protein] and L-alanine to produce 8-amino-7- oxononanoate (AON), [acyl-carrier protein], and carbon dioxide (388 aa)
   
 
  0.543
acp
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (103 aa)
     
 
  0.518
gsl1945
Hypothetical protein (95 aa)
     
 
  0.518
gsl1937
Hypothetical protein (94 aa)
     
 
  0.518
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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