STRINGSTRING
gll2007 protein (Gloeobacter violaceus) - STRING interaction network
"gll2007" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2007Hypothetical protein (498 aa)    
Predicted Functional Partners:
glr4054
Amidase (519 aa)
       
    0.901
gll2006
Hypothetical protein (125 aa)
              0.859
gll3162
Hypothetical protein (353 aa)
   
   
    0.846
gll2005
Oxidoreductase (290 aa)
              0.689
gll3945
Transposase (109 aa)
   
          0.678
glr3392
Hypothetical protein (198 aa)
   
          0.630
glr2008
Transposase (303 aa)
              0.610
gll2731
Hypothetical protein (135 aa)
 
 
      0.579
glr4291
Hypothetical protein (197 aa)
   
          0.577
gll4219
Hypothetical protein (214 aa)
   
          0.558
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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