STRINGSTRING
gll2018 protein (Gloeobacter violaceus) - STRING interaction network
"gll2018" - DNA-3-methyladenine glycosylase in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2018DNA-3-methyladenine glycosylase (206 aa)    
Predicted Functional Partners:
glr3610
methylated-DNA--protein-cysteine S-methyltransferase (124 aa)
 
   
  0.928
glr3609
AraC family transcriptional regulator (535 aa)
 
 
0.886
glr0140
Exodeoxyribonuclease III (258 aa)
   
  0.829
gll2020
Hypothetical protein (211 aa)
              0.724
gll2019
Hypothetical protein (112 aa)
              0.724
polA
DNA polymerase I (938 aa)
   
 
  0.711
ccs1
C-type cytochrome biogenesis protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (474 aa)
              0.552
ccsA
C-type cytochrome biogenesis protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (338 aa)
              0.550
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (369 aa)
     
 
  0.521
glr2023
Signal peptidase I (191 aa)
   
        0.501
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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