STRINGSTRING
gll2020 protein (Gloeobacter violaceus) - STRING interaction network
"gll2020" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2020Hypothetical protein (211 aa)    
Predicted Functional Partners:
gll2019
Hypothetical protein (112 aa)
              0.859
gll0546
Hypothetical protein (334 aa)
   
        0.773
psbO
Photosystem II manganese-stabilizing polypeptide (258 aa)
   
        0.770
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis (228 aa)
   
        0.748
psbP
Hypothetical protein (195 aa)
   
        0.747
glr4199
Hypothetical protein (445 aa)
   
          0.744
ccs1
C-type cytochrome biogenesis protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (474 aa)
 
          0.735
gll2018
DNA-3-methyladenine glycosylase (206 aa)
              0.724
cpeA
Phycoerythrin alpha chain (164 aa)
   
          0.720
gll1742
Hypothetical protein (202 aa)
   
        0.710
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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