STRINGSTRING
gll2047 protein (Gloeobacter violaceus) - STRING interaction network
"gll2047" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2047Hypothetical protein (278 aa)    
Predicted Functional Partners:
gll1462
Circadian phase modifier CpmA-like protein (272 aa)
 
     
  0.876
gll0542
Hypothetical protein (421 aa)
 
          0.860
gsl2046
Hypothetical protein (65 aa)
              0.859
gll2048
Hypothetical protein (269 aa)
              0.859
gll3752
Oxidoreductase (372 aa)
 
          0.636
glr2049
Hypothetical protein (314 aa)
              0.611
gll0292
Cobalamin biosynthesis protein CbiM-like protein (230 aa)
 
          0.558
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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