STRINGSTRING
gll2187 protein (Gloeobacter violaceus) - STRING interaction network
"gll2187" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2187Transposase (169 aa)    
Predicted Functional Partners:
gll2186
Acetyltransferase (369 aa)
              0.759
gll2188
Glycosyl transferase (217 aa)
              0.575
gll2189
Glycosyl transferase (312 aa)
              0.492
gll2191
Hypothetical protein (484 aa)
              0.485
gll2190
Hypothetical protein (288 aa)
              0.485
gll2185
Glucose-1-phosphate cytidylyltransferase (271 aa)
              0.422
gll2184
Hypothetical protein (215 aa)
              0.422
gll2192
Glycosyl transferase (312 aa)
              0.420
gll2183
Mannose-1-phosphate guanylyltransferase (133 aa)
              0.403
gll2182
Hypothetical protein (840 aa)
              0.403
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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