STRINGSTRING
gll2320 protein (Gloeobacter violaceus) - STRING interaction network
"gll2320" - Small subunit of soluble hydrogenase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2320Small subunit of soluble hydrogenase (385 aa)    
Predicted Functional Partners:
metS
methionyl-tRNA synthetase (516 aa)
 
 
      0.836
thyX
FAD-dependent thymidylate synthase; Catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate (257 aa)
   
   
  0.667
serA
D-3-phosphoglycerate dehydrogenase (526 aa)
 
   
  0.662
glr3776
Phosphoglycerate dehydrogenase (310 aa)
 
   
  0.646
gll2319
Hypothetical protein (217 aa)
              0.602
glr3684
Hydrolase, CbbY protein (255 aa)
 
   
  0.594
glr3176
Hypothetical protein (235 aa)
   
   
  0.513
glr2345
Hypothetical protein (221 aa)
   
   
  0.513
glr3436
Oxidoreductase (981 aa)
 
   
  0.510
pheT
phenylalanyl-tRNA synthetase subunit beta (785 aa)
   
      0.495
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (10%) [HD]