STRINGSTRING
gll2350 protein (Gloeobacter violaceus) - STRING interaction network
"gll2350" - Amino acid transporter in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2350Amino acid transporter (456 aa)    
Predicted Functional Partners:
glr3646
Neopullulanase (480 aa)
     
  0.904
glr0373
Cyclomaltodextrin glucanotransferase (642 aa)
     
  0.904
gll1595
Alpha-amylase (620 aa)
     
  0.904
gll2351
Hypothetical protein (158 aa)
              0.700
gll2349
alanyl-tRNA synthetase (449 aa)
   
   
  0.587
gll1651
Hypothetical protein (224 aa)
 
          0.575
glr1011
Hypothetical protein (284 aa)
 
          0.560
gll1774
Aspartate kinase (601 aa)
     
 
  0.533
gll0958
Urea amidolyase (1202 aa)
   
   
  0.520
gll2352
Glycosyltransferase (384 aa)
              0.508
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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