STRINGSTRING
gll2601 protein (Gloeobacter violaceus) - STRING interaction network
"gll2601" - Aminotransferase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2601Aminotransferase (412 aa)    
Predicted Functional Partners:
ycf24
Cysteine desulfurase (482 aa)
 
 
  0.820
glr1372
Hypothetical protein (444 aa)
 
 
  0.820
glr1371
ABC transporter ATP-binding protein (252 aa)
 
   
  0.729
ycf57
Hypothetical protein (116 aa)
   
 
  0.680
gll4382
Hypothetical protein (124 aa)
   
 
  0.680
glr2602
Hypothetical protein (217 aa)
 
          0.677
pheT
phenylalanyl-tRNA synthetase subunit beta (785 aa)
   
        0.620
glr1374
Hypothetical protein (148 aa)
 
 
  0.579
gll3950
L-cysteine/cystine lyase (378 aa)
   
          0.558
glr4397
Hypothetical protein (248 aa)
 
        0.474
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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