STRINGSTRING
gll2707 protein (Gloeobacter violaceus) - STRING interaction network
"gll2707" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2707Hypothetical protein (197 aa)    
Predicted Functional Partners:
gll2708
RNA polymerase ECF-type (group 3) sigma factor (189 aa)
 
          0.822
glr3449
Hypothetical protein (165 aa)
   
          0.669
gll4265
Hypothetical protein (294 aa)
   
          0.575
glr0454
Hypothetical protein (676 aa)
   
          0.551
gll0770
Hypothetical protein (466 aa)
   
          0.539
gll3803
Hypothetical protein (215 aa)
   
          0.538
gll3597
Hypothetical protein (216 aa)
   
          0.536
gll1512
Hypothetical protein (227 aa)
   
          0.536
gll3945
Transposase (109 aa)
   
          0.522
psbV1
Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen-evolving complex of photosystem II (183 aa)
   
          0.514
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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