STRINGSTRING
katG protein (Gloeobacter violaceus) - STRING interaction network
"katG" - Catalase/peroxidase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katGCatalase/peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (735 aa)    
Predicted Functional Partners:
glr4327
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (203 aa)
     
  0.972
gll0682
Superoxide dismutase (316 aa)
     
  0.969
glr1981
Superoxide dismutase (233 aa)
       
  0.926
glr2170
Superoxide dismutase (191 aa)
       
  0.923
glr3848
Aldehyde dehydrogenase (498 aa)
     
  0.918
gll1504
Aldehyde dehydrogenase (512 aa)
     
  0.918
glr2600
Aspartate aminotransferase (395 aa)
     
 
    0.906
gll2475
Histidinol-phosphate aminotransferase (410 aa)
         
  0.902
gll1323
Histidinol-phosphate aminotransferase (353 aa)
         
  0.902
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (347 aa)
     
   
  0.828
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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