STRINGSTRING
gll2830 protein (Gloeobacter violaceus) - STRING interaction network
"gll2830" - Polyketide synthase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2830Polyketide synthase (108 aa)    
Predicted Functional Partners:
gll2829
Polyketide synthase (1199 aa)
 
   
  0.915
gll2831
Hypothetical protein (555 aa)
   
        0.864
gll2832
Hypothetical protein (869 aa)
 
   
  0.798
gll1954
Polyketide synthase (2049 aa)
 
   
  0.779
gsl1945
Hypothetical protein (95 aa)
   
          0.778
gll2828
Hypothetical protein (223 aa)
              0.738
gll1941
Polyketide synthase (963 aa)
 
   
  0.733
gll1948
acyl-CoA synthetase (596 aa)
 
   
  0.719
gll2827
Hypothetical protein (424 aa)
 
        0.714
gll1953
acyl-CoA synthetase (584 aa)
 
   
  0.693
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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