STRINGSTRING
gll2838 protein (Gloeobacter violaceus) - STRING interaction network
"gll2838" - Short chain dehydrogenase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2838Short chain dehydrogenase (249 aa)    
Predicted Functional Partners:
gll2839
RND multidrug efflux transporter (1059 aa)
              0.686
gsl2837
Hypothetical protein (78 aa)
              0.619
gll2836
Alcohol dehydrogenase (330 aa)
 
   
  0.617
putA
1-pyrroline-5-carboxylate dehydrogenase (996 aa)
   
 
  0.599
gll2841
Oxidoreductase (327 aa)
   
   
  0.595
gll2840
Hypothetical protein (410 aa)
              0.590
gll2145
Malonyl CoA-ACP transacylase (295 aa)
   
 
  0.521
gll2833
Oxidoreductase (251 aa)
 
 
0.510
glr2167
ABC transporter ATP-binding protein (335 aa)
 
 
 
  0.485
glr3421
ABC transporter ATP-binding protein (246 aa)
 
 
 
  0.479
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (12%) [HD]