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gll2839 protein (Gloeobacter violaceus) - STRING interaction network
"gll2839" - RND multidrug efflux transporter in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2839RND multidrug efflux transporter (1059 aa)    
Predicted Functional Partners:
gll2840
Hypothetical protein (410 aa)
 
   
  0.965
glr4027
RND efflux membrane fusion protein (482 aa)
 
 
  0.889
glr3987
Hypothetical protein (406 aa)
 
   
  0.873
gll2838
Short chain dehydrogenase (249 aa)
              0.686
glr0805
Hypothetical protein (426 aa)
 
          0.681
gll2841
Oxidoreductase (327 aa)
         
  0.676
glr1143
Hypothetical protein (634 aa)
 
 
  0.654
gll2495
HlyD family secretion protein (433 aa)
 
          0.620
gll0775
Hypothetical protein (448 aa)
   
          0.619
gll0875
HlyD family multidrug efflux protein (393 aa)
          0.604
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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