STRINGSTRING
gll2890 protein (Gloeobacter violaceus) - STRING interaction network
"gll2890" - Ketosteroid isomerase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll2890Ketosteroid isomerase (130 aa)    
Predicted Functional Partners:
glr1915
Hypothetical protein (1135 aa)
   
          0.756
gll3456
Hypothetical protein (602 aa)
   
          0.714
glr0359
Hypothetical protein (280 aa)
   
          0.704
gll0478
Hypothetical protein (281 aa)
   
          0.704
glr1174
Hypothetical protein (333 aa)
   
          0.703
gll4176
Hypothetical protein (342 aa)
   
          0.703
glr2142
Hypothetical protein (291 aa)
   
          0.664
glr2510
Hypothetical protein (531 aa)
   
          0.659
gll0018
Hypothetical protein (189 aa)
   
          0.648
gll3457
Hypothetical protein (596 aa)
   
          0.633
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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