STRINGSTRING
gll3100 protein (Gloeobacter violaceus) - STRING interaction network
"gll3100" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3100Hypothetical protein (359 aa)    
Predicted Functional Partners:
gll3099
Chloromuconate cycloisomerase (356 aa)
          0.963
gll3098
Penicillin-binding protein (364 aa)
              0.859
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (313 aa)
              0.819
gll3102
Carboxyl-terminal protease (445 aa)
              0.819
gll3097
Hypothetical protein (120 aa)
              0.632
glr2470
Hypothetical protein (188 aa)
   
          0.619
glr1366
Hypothetical protein (184 aa)
   
          0.614
gll2410
Hypothetical protein (191 aa)
   
          0.611
glr2781
Hypothetical protein (209 aa)
   
          0.604
glr1074
Folylpolyglutamate synthase (413 aa)
   
          0.529
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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