STRINGSTRING
gll3162 protein (Gloeobacter violaceus) - STRING interaction network
"gll3162" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3162Hypothetical protein (353 aa)    
Predicted Functional Partners:
glr4054
Amidase (519 aa)
       
    0.901
gll2731
Hypothetical protein (135 aa)
 
 
      0.881
gll3163
Hypothetical protein (307 aa)
              0.856
gll2007
Hypothetical protein (498 aa)
   
   
    0.846
glr1146
Long-chain fatty-acid-CoA ligase (503 aa)
 
 
  0.531
gll1950
Long-chain fatty-acid-CoA ligase (532 aa)
 
 
  0.527
glr0435
long-chain-fatty-acid-CoA ligase (502 aa)
 
 
  0.526
glr1375
Hypothetical protein (103 aa)
   
   
  0.473
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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