STRINGSTRING
gll3227 protein (Gloeobacter violaceus) - STRING interaction network
"gll3227" - Transcriptional regulator in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3227Transcriptional regulator (295 aa)    
Predicted Functional Partners:
glr0326
AraC family transcriptional regulator (330 aa)
   
          0.725
gll3226
Hypothetical protein (157 aa)
              0.655
gll0324
AraC family transcriptional regulator (341 aa)
   
          0.558
gsr3228
Hypothetical protein (98 aa)
              0.475
glr3444
MerR family transcriptional regulator (282 aa)
   
          0.425
glr3850
Hypothetical protein (286 aa)
   
          0.409
glr0459
Glycosyltransferase (391 aa)
   
          0.402
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (7%) [HD]