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gll3247 protein (Gloeobacter violaceus) - STRING interaction network
"gll3247" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3247Hypothetical protein (196 aa)    
Predicted Functional Partners:
gll4200
Cell surface glycoprotein (s-layer protein) related protein (697 aa)
   
          0.690
glr2078
Hypothetical protein (495 aa)
   
          0.686
glr3220
Hypothetical protein (295 aa)
   
          0.680
gll4248
Hypothetical protein (985 aa)
   
          0.639
gll3249
Hypothetical protein (228 aa)
              0.589
miaA
tRNA delta-2-isopentenylpyrophosphate; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (302 aa)
              0.589
gll3961
Hypothetical protein (170 aa)
   
          0.586
glr2749
Two-component hybrid sensor and regulator (1296 aa)
   
        0.550
gll4130
Ribonuclease (381 aa)
   
          0.531
gll0736
Hypothetical protein (260 aa)
 
          0.511
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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