STRINGSTRING
gll3290 protein (Gloeobacter violaceus) - STRING interaction network
"gll3290" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3290Hypothetical protein (336 aa)    
Predicted Functional Partners:
gll3288
Hypothetical protein (319 aa)
 
 
  0.960
gll3289
Hypothetical protein (330 aa)
 
          0.916
gsl0042
Hypothetical protein (92 aa)
   
          0.632
glr3291
TetR family transcriptional regulatory protein (236 aa)
              0.627
gsr0184
Hypothetical protein (79 aa)
   
          0.618
tatC
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes (261 aa)
       
 
  0.617
gll0169
Hypothetical protein (180 aa)
   
          0.600
glr4047
Cation-transporting ATPase (747 aa)
   
 
  0.584
glr1997
Cation transporting ATPase (163 aa)
   
 
  0.584
gll4390
Hypothetical protein (145 aa)
   
          0.548
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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