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gll3396 protein (Gloeobacter violaceus) - STRING interaction network
"gll3396" - Xaa-Pro dipeptidase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3396Xaa-Pro dipeptidase (254 aa)    
Predicted Functional Partners:
gll3395
Xaa-Pro dipeptidase (233 aa)
          0.996
gll3171
Hypothetical protein (445 aa)
   
          0.753
gll0760
Hypothetical protein (1016 aa)
   
          0.710
glr0243
Hypothetical protein (462 aa)
   
          0.654
hutH
Histidine ammonia-lyase (514 aa)
   
   
  0.609
gll1307
D-aminoacylase (491 aa)
 
          0.536
gsr3399
Hypothetical protein (65 aa)
              0.534
gsr3398
Hypothetical protein (64 aa)
              0.534
gsr3397
Hypothetical protein (82 aa)
              0.534
glr3518
Hypothetical protein (375 aa)
     
 
  0.515
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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