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gll3425 protein (Gloeobacter violaceus) - STRING interaction network
"gll3425" - Penicillin-binding protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3425Penicillin-binding protein (615 aa)    
Predicted Functional Partners:
glr1486
Rod-shape-determining protein MrdB-like protein (418 aa)
 
  0.985
gll1671
UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (357 aa)
 
  0.982
ftsW
Cell division protein (431 aa)
 
  0.978
glr4399
Rod shape-determining protein MreB (348 aa)
 
 
  0.948
glr1467
Rod shape-determining protein MreB (343 aa)
 
 
  0.947
gll2229
Rod shape-determining protein MreB (343 aa)
 
 
  0.945
gll0299
Hypothetical protein (271 aa)
   
 
  0.898
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation (460 aa)
 
 
  0.894
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (450 aa)
 
 
  0.880
ddl
D-alanine--D-alanine ligase; Cell wall formation (302 aa)
 
 
 
  0.874
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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