STRINGSTRING
gll3516 protein (Gloeobacter violaceus) - STRING interaction network
"gll3516" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3516Hypothetical protein (304 aa)    
Predicted Functional Partners:
glr1221
Hypothetical protein (227 aa)
   
          0.694
glr1537
Hypothetical protein (356 aa)
   
          0.649
glr3517
Hypothetical protein (441 aa)
              0.615
glr3518
Hypothetical protein (375 aa)
              0.602
gll3515
Hypothetical protein (272 aa)
              0.578
gll3694
Hypothetical protein (483 aa)
   
          0.485
gll0794
Hypothetical protein (386 aa)
   
          0.481
glr3251
Hypothetical protein (889 aa)
   
          0.468
glr1064
Hypothetical protein (394 aa)
   
          0.410
gsr3527
Hypothetical protein (80 aa)
   
          0.407
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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