STRINGSTRING
gll3552 protein (Gloeobacter violaceus) - STRING interaction network
"gll3552" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3552Hypothetical protein (113 aa)    
Predicted Functional Partners:
gsl3553
Hypothetical protein (84 aa)
              0.815
glr2750
Hypothetical protein (295 aa)
   
          0.759
gll0046
Hypothetical protein (593 aa)
   
          0.666
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (362 aa)
              0.662
gll3627
Hypothetical protein (321 aa)
   
          0.610
gll0047
Hypothetical protein (585 aa)
   
          0.607
gll3628
Hypothetical protein (319 aa)
   
          0.603
glr2751
Hypothetical protein (315 aa)
   
          0.598
glr3554
Hypothetical protein (288 aa)
              0.590
glr3850
Hypothetical protein (286 aa)
   
          0.586
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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