STRINGSTRING
gll3598 protein (Gloeobacter violaceus) - STRING interaction network
"gll3598" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3598Hypothetical protein (669 aa)    
Predicted Functional Partners:
gll1923
Phytoene dehydrogenase (654 aa)
   
 
  0.978
gll0394
Beta-carotene ketolase (573 aa)
     
 
  0.937
pds
Phytoene dehydrogenase (560 aa)
   
 
  0.915
gll1728
Beta-carotene ketolase (257 aa)
     
 
  0.913
gll2484
Hypothetical protein (514 aa)
   
   
0.858
gll3597
Hypothetical protein (216 aa)
 
          0.813
gsl4316
Hypothetical protein (94 aa)
   
          0.777
gll3317
Hypothetical protein (135 aa)
   
          0.777
gll3249
Hypothetical protein (228 aa)
   
          0.773
gll2552
Fibrillin-like protein (199 aa)
   
        0.770
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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