STRINGSTRING
gll3620 protein (Gloeobacter violaceus) - STRING interaction network
"gll3620" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3620Hypothetical protein (227 aa)    
Predicted Functional Partners:
gll3621
Hypothetical protein (205 aa)
     
  0.993
gll3157
Hypothetical protein (151 aa)
     
  0.952
ccdA
C-type cytochrome biogenesis protein (242 aa)
   
          0.517
gll1819
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (237 aa)
 
     
  0.476
ccsA
C-type cytochrome biogenesis protein; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (338 aa)
   
   
  0.468
glr3964
Hypothetical protein (203 aa)
         
  0.461
glr3388
TrxA (117 aa)
         
  0.461
glr2108
Hypothetical protein (193 aa)
         
  0.461
gll0880
Thioredoxin (110 aa)
         
  0.461
gll0387
Hypothetical protein (544 aa)
     
  0.459
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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