STRINGSTRING
gll3689 protein (Gloeobacter violaceus) - STRING interaction network
"gll3689" - Lignostilbene-alpha,beta-dioxygenase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3689Lignostilbene-alpha,beta-dioxygenase (482 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (292 aa)
              0.662
gll4395
Hypothetical protein (260 aa)
   
          0.564
glr2246
Hypothetical protein (165 aa)
   
          0.552
gll1931
Hypothetical protein (553 aa)
   
          0.548
gll1964
Dimethylaniline monoxygenase (486 aa)
   
          0.526
gll3688
Hypothetical protein (341 aa)
              0.522
psbO
Photosystem II manganese-stabilizing polypeptide (258 aa)
   
        0.442
por
Protochlorophyllide oxidoreductase (318 aa)
   
     
  0.425
glr0287
Hypothetical protein (222 aa)
   
        0.407
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
Server load: low (13%) [HD]