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gll3808 protein (Gloeobacter violaceus) - STRING interaction network
"gll3808" - AraC family transcriptional regulator in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3808AraC family transcriptional regulator (293 aa)    
Predicted Functional Partners:
glr0326
AraC family transcriptional regulator (330 aa)
   
          0.748
gll0335
AraC family transcriptional regulator (327 aa)
   
          0.740
gll0324
AraC family transcriptional regulator (341 aa)
   
          0.629
glr3809
Hypothetical protein (526 aa)
   
        0.582
gsr3810
Hypothetical protein (89 aa)
              0.540
gll1826
AraC family transcriptional regulator (336 aa)
   
          0.487
gcvT
Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine (367 aa)
       
      0.463
gll2137
Oxidoreductase (351 aa)
       
      0.463
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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