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gll3939 protein (Gloeobacter violaceus) - STRING interaction network
"gll3939" - Hypothetical protein in Gloeobacter violaceus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
gll3939Hypothetical protein (223 aa)    
Predicted Functional Partners:
glr3198
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (765 aa)
 
   
  0.709
gll3938
Hypothetical protein (343 aa)
     
      0.670
glr3940
Hypothetical protein (228 aa)
              0.637
gll1453
Poly A polymerase (582 aa)
   
        0.621
glr1502
Hypothetical protein (377 aa)
   
        0.594
gll3937
Hypothetical protein (155 aa)
              0.588
gll2048
Hypothetical protein (269 aa)
        0.531
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (364 aa)
   
   
  0.529
pheT
phenylalanyl-tRNA synthetase subunit beta (785 aa)
 
        0.529
metS
methionyl-tRNA synthetase (516 aa)
   
        0.504
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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