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gll3998 protein (Gloeobacter violaceus) - STRING interaction network
"gll3998" - Isocitrate dehydrogenase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll3998Isocitrate dehydrogenase (409 aa)    
Predicted Functional Partners:
glr4087
Aconitate hydratase (645 aa)
   
  0.962
icd
Isocitrate dehydrogenase (359 aa)
   
  0.955
gdhA
Glutamate dehydrogenase (458 aa)
     
  0.866
glr2600
Aspartate aminotransferase (395 aa)
   
 
  0.850
gll2805
Succinate-semialdehyde dehydrogenase (462 aa)
   
 
  0.835
ldh
L-lactate dehydrogenase A chain (330 aa)
   
 
  0.825
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (325 aa)
   
 
  0.825
purB
Adenylosuccinate lyase (431 aa)
   
 
    0.816
argH
Argininosuccinate lyase (468 aa)
     
 
    0.803
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (530 aa)
         
    0.800
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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