STRINGSTRING
gll4002 protein (Gloeobacter violaceus) - STRING interaction network
"gll4002" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll4002Hypothetical protein (1032 aa)    
Predicted Functional Partners:
gll3169
Hypothetical protein (346 aa)
 
          0.871
gll3206
Hypothetical protein (543 aa)
 
          0.675
gll3207
Hypothetical protein (602 aa)
 
          0.624
gll3375
Hypothetical protein (535 aa)
 
          0.623
glr0952
Hypothetical protein (181 aa)
   
          0.464
gll4003
Hypothetical protein (619 aa)
              0.458
gll4004
Hypothetical protein (313 aa)
              0.456
gll0565
Chromate transport protein (423 aa)
   
          0.456
gll2957
Hypothetical protein (288 aa)
   
          0.419
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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