STRINGSTRING
gll4406 protein (Gloeobacter violaceus) - STRING interaction network
"gll4406" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll4406Hypothetical protein (186 aa)    
Predicted Functional Partners:
glr1282
Hypothetical protein (211 aa)
   
          0.771
glr2720
HlyB/MsbA family ABC transporter (583 aa)
   
          0.629
glr4407
Hypothetical protein (103 aa)
              0.561
gll1281
Hypothetical protein (301 aa)
   
          0.551
glr1422
Hypothetical protein (292 aa)
   
          0.531
glr4408
Hypothetical protein (121 aa)
              0.475
glr3133
Hypothetical protein (692 aa)
   
          0.452
glr2719
HlyB/MsbA family ABC transporter (595 aa)
   
          0.452
glr2033
Hypothetical protein (298 aa)
   
          0.443
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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