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gll4427 protein (Gloeobacter violaceus) - STRING interaction network
"gll4427" - LysR family transcriptional regulator in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gll4427LysR family transcriptional regulator (288 aa)    
Predicted Functional Partners:
gll3758
LysR family transcriptional regulator (304 aa)
   
          0.753
glr2551
LysR family transcriptional regulator (316 aa)
   
          0.733
glr4428
Hypothetical protein (180 aa)
              0.625
gll2860
LysR family transcriptional regulator (321 aa)
   
          0.562
glr2798
Two-component response regulator (234 aa)
   
          0.501
glr2274
Two-component response regulator (234 aa)
   
          0.408
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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