STRINGSTRING
glr0006 protein (Gloeobacter violaceus) - STRING interaction network
"glr0006" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0006Hypothetical protein (148 aa)    
Predicted Functional Partners:
glr0005
Arsenical resistance protein ArsH-like protein (228 aa)
              0.741
glr0004
Arsenate reductase (138 aa)
              0.738
glr0003
Channel protein (271 aa)
              0.738
glr0002
Transcription regulator ArsR (110 aa)
              0.599
glr0007
Transcription regulator ArsR (110 aa)
              0.574
glr1537
Hypothetical protein (356 aa)
   
          0.551
glr0001
Hypothetical protein (157 aa)
              0.461
glr2247
Hypothetical protein (453 aa)
   
          0.445
gll2460
Hypothetical protein (867 aa)
   
          0.437
gll4131
ATP-dependent protease (342 aa)
   
          0.434
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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