STRINGSTRING
glr0029 protein (Gloeobacter violaceus) - STRING interaction network
"glr0029" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0029Hypothetical protein (179 aa)    
Predicted Functional Partners:
glr0028
Hypothetical protein (152 aa)
              0.778
rpmI
50S ribosomal protein L35 (65 aa)
     
        0.708
gll3158
Peroxiredoxin (184 aa)
   
 
  0.644
glr2155
AhpC/TSA family protein (212 aa)
   
 
  0.643
gll0506
Bacterioferritin comigratory protein (148 aa)
 
 
0.633
glr1776
Flavoprotein (579 aa)
              0.600
glr1775
Flavoprotein (584 aa)
              0.600
gll1742
Hypothetical protein (202 aa)
   
        0.591
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (74 aa)
     
        0.544
hisI
phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (218 aa)
         
  0.539
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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