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glr0140 protein (Gloeobacter violaceus) - STRING interaction network
"glr0140" - Exodeoxyribonuclease III in Gloeobacter violaceus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
glr0140Exodeoxyribonuclease III (258 aa)    
Predicted Functional Partners:
gll1821
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity (220 aa)
 
 
  0.989
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (232 aa)
 
 
  0.983
gll0866
A/G-specific adenine glycosylase (375 aa)
     
  0.971
dnaN
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (376 aa)
     
  0.964
polA
DNA polymerase I (938 aa)
     
  0.963
gll1432
DNA polymerase III subunit delta’ (308 aa)
     
  0.903
glr3609
AraC family transcriptional regulator (535 aa)
   
  0.840
gll2018
DNA-3-methyladenine glycosylase (206 aa)
   
  0.829
glr1079
Bifunctional orotidine 5’-phosphate decarboxylase/orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (484 aa)
   
   
  0.679
gll0139
Hypothetical protein (227 aa)
              0.638
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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