STRINGSTRING
glr0146 protein (Gloeobacter violaceus) - STRING interaction network
"glr0146" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0146Transposase (467 aa)    
Predicted Functional Partners:
gll0145
Hypothetical protein (169 aa)
              0.658
gll0144
Hypothetical protein (146 aa)
              0.658
nrdR
Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes (172 aa)
              0.648
gll0142
Hypothetical protein (128 aa)
              0.639
gsr0615
Hypothetical protein (83 aa)
   
          0.453
gll2006
Hypothetical protein (125 aa)
   
          0.453
gsl0141
Hypothetical protein (60 aa)
              0.441
gll1669
Hypothetical protein (144 aa)
   
          0.431
gll3694
Hypothetical protein (483 aa)
   
          0.410
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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