STRINGSTRING
glr0172 protein (Gloeobacter violaceus) - STRING interaction network
"glr0172" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0172Transposase (371 aa)    
Predicted Functional Partners:
gll1195
Transposase (351 aa)
   
          0.743
gll0209
Transposase (351 aa)
   
          0.743
gll0209
Transposase (351 aa)
   
          0.743
glr0872
Transposase (351 aa)
   
          0.742
gll1093
Transposase (351 aa)
   
          0.742
gll1093
Transposase (351 aa)
   
          0.742
glr0761
Transposase (351 aa)
   
          0.740
glr4099
Hypothetical protein (280 aa)
   
          0.701
glr3944
Transposase (175 aa)
   
          0.691
glr2130
Transposase (190 aa)
   
          0.686
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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