STRINGSTRING
glr0398 protein (Gloeobacter violaceus) - STRING interaction network
"glr0398" - Hypothetical protein in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0398Hypothetical protein (251 aa)    
Predicted Functional Partners:
gll0067
Carboxyl-terminal processing protease (423 aa)
 
 
  0.662
gll3102
Carboxyl-terminal protease (445 aa)
 
 
  0.640
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl- [acyl-carrier protein] and L-alanine to produce 8-amino-7- oxononanoate (AON), [acyl-carrier protein], and carbon dioxide (388 aa)
         
  0.627
gll0119
Carboxyl-terminal protease (428 aa)
 
 
  0.611
gll1309
Carboxyl-terminal protease (433 aa)
 
 
  0.610
gll0648
Cell-division protein FtsX-like protein (293 aa)
 
 
      0.554
secF
Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (308 aa)
 
 
 
  0.509
glr1525
Hypothetical protein (481 aa)
   
 
  0.495
glr0626
Carboxyl-terminal processing protease (253 aa)
   
 
  0.495
glr1491
Penicillin-binding protein (730 aa)
   
   
  0.466
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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