STRINGSTRING
glr0638 protein (Gloeobacter violaceus) - STRING interaction network
"glr0638" - Porin in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0638Porin (586 aa)    
Predicted Functional Partners:
gll2537
Hypothetical protein (293 aa)
   
          0.776
gll2309
Hypothetical protein (452 aa)
   
          0.774
cupB
Hypothetical protein (375 aa)
   
          0.773
gll2630
Hypothetical protein (429 aa)
   
          0.773
glr3263
Hypothetical protein (148 aa)
   
          0.766
gsr2714
CAB/ELIP/HLIP superfamily protein (53 aa)
   
          0.764
glr0489
Hypothetical protein (214 aa)
   
          0.755
gll2308
Hypothetical protein; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (136 aa)
   
          0.750
glr3379
Hypothetical protein (114 aa)
   
          0.741
gll1808
Hypothetical protein (470 aa)
   
          0.740
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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