STRINGSTRING
glr0872 protein (Gloeobacter violaceus) - STRING interaction network
"glr0872" - Transposase in Gloeobacter violaceus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glr0872Transposase (351 aa)    
Predicted Functional Partners:
glr0172
Transposase (371 aa)
   
          0.742
gll4410
Hypothetical protein (677 aa)
   
          0.626
gll3344
Hypothetical protein (845 aa)
   
          0.571
glr1904
Hypothetical protein (909 aa)
   
          0.537
glr0871
Hypothetical protein (195 aa)
 
          0.529
glr4051
Hypothetical protein (221 aa)
   
          0.527
glr1560
Hypothetical protein (259 aa)
   
          0.525
gll3307
Hypothetical protein (284 aa)
   
          0.520
glr0393
Hypothetical protein (226 aa)
   
          0.509
gll1513
Hypothetical protein (253 aa)
   
          0.506
Your Current Organism:
Gloeobacter violaceus
NCBI taxonomy Id: 251221
Other names: G. violaceus, G. violaceus PCC 7421, Gloeobacter, Gloeobacter violaceus, Gloeobacter violaceus ATCC 29082, Gloeobacter violaceus PCC 7421, Gloeobacter violaceus str. PCC 7421, Gloeobacter violaceus strain PCC 7421, Gloeobacterales, Gloeobacterales Cavalier-Smith 2002, Gloeobacteria, Gloeobacteria Cavalier-Smith 2002
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